PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10020610
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family bZIP
Protein Properties Length: 537aa    MW: 59587.6 Da    PI: 7.3045
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10020610genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.77e-10232262434
                  XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeek 34 
                   k  rr+++NReAAr+sR+RKka++++Le  
  Lus10020610 232 AKTLRRLAQNREAARKSRLRKKAYVQQLESS 262
                  6889************************974 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.4E-7229306IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.278231275IPR004827Basic-leucine zipper domain
PfamPF001704.8E-7232266IPR004827Basic-leucine zipper domain
CDDcd147081.16E-23233283No hitNo description
SuperFamilySSF579592.19E-6233275No hitNo description
Gene3DG3DSA:1.20.5.1705.8E-7234277No hitNo description
PROSITE patternPS000360236251IPR004827Basic-leucine zipper domain
PfamPF141443.0E-31314389IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 537 aa     Download sequence    Send to blast
MGSSHRMGET GLSDSGPSTT HHHLPYALLH GMNPPSNSTA FMHQDGPAFD FGELEEAIVL  60
QGVKIRNEPA RSQVEVGSSS GLFGEGVGRP AATTLEMFPS WPMRFHPHHH QQQHQQQHQQ  120
QHTPIGSSRS GGESTDSGSG VNTTISEAHH NHHQHQHLHQ PESPMSTKKA ASSSSDHFHH  180
FQQMDMVAAV SNGVGVGPSS SCQQQNQNQS SDHKPSTTDK RKGTTSEKPL DAKTLRRLAQ  240
NREAARKSRL RKKAYVQQLE SSRIKLAQME QELQRARQQG LFMGGCGGAG GNLSSAAAMF  300
DMEYARWLED DLRHMSELRT GLNAHLSDGD LRDVVDRYIS HYDEIFRLKG MTTKSDVFHL  360
ITGMWTTPAE RCFLWMGGFR PSELIKMLIS QLDPLTEQQV MGIYNLQHSS QQAEDAMSQG  420
LEQLQQSLVD TIAGGPVVDG MQQMAVALGK LSNLEGFVRQ ADNLRQQTLH QLRRILTVRQ  480
AARCFLVIGE YYGRLRALSS LWASRPRDAM MGDENSCQTT TDLQMVQSSH SHFANF*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012077858.10.0PREDICTED: transcription factor TGA2 isoform X2
SwissprotO241601e-132TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLA0A067KMV40.0A0A067KMV4_JATCU; Uncharacterized protein
STRINGPOPTR_0009s16590.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45553357
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.30.0bZIP family protein